Insertion junction: CLIP2.078306_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078306
Chromosome:chromosome 5
Location:1470310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234649 (1 of 13) PF00646 - F-box domain (F-box) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGGATGGGCTCCCGGAACCCAACGGACCCCCAGGGACGACGACTAA
Internal bar code:CATAGTCTCAAGGCGCTTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1718
LEAP-Seq percent confirming:52.0833
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACGAACACCCTGCTCTG
Suggested primer 2:CCCCTCGCTGTAACCAACAT