Insertion junction: CLIP2.078306_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078306
Chromosome:chromosome 5
Location:1470312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234649 (1 of 13) PF00646 - F-box domain (F-box) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGGGAATCGGGAAACGCCCCGCTAGCAAAACCTAGGCGCCCAACGC
Internal bar code:TATGCTTGATACTACGTGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1199
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCGCTGTAACCAACAT
Suggested primer 2:AGAACGAACACCCTGCTCTG