Insertion junction: CLIP2.078308_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078308
Chromosome:chromosome 2
Location:6716848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387393 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTGCAGAAGAGCCACTGCTGTTGAAAACCAGTTTCTGACCGCCCTTT
Internal bar code:AACTTCCGTTAATATCATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCATCGACCGTGTTGGG
Suggested primer 2:GCAATGTGCTCTGCGATCTG