Insertion junction: CLIP2.078321_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078321
Chromosome:chromosome 12
Location:9370090
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g541700 OPR54 OctotricoPeptide Repeat protein 54 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCCTGCCCGGCGGCGCACCTGTCCCGCACCGACGCCAGCTGTAGC
Internal bar code:TCTAAGACTCCTCACCCGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGCATCCTAGCCTCACT
Suggested primer 2:CACAGCGCCATTGATACGTC