Insertion junction: CLIP2.078325_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078325
Chromosome:chromosome 5
Location:2965451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230600 UVR8 Ultraviolet-B receptor 8; (1 of 1) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGACCCTCCAGCCCTGGGCTCAGCAGCCGGGCATACGTGTAGCTAG
Internal bar code:GTTCCAAAAGGTGACTTAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4392
LEAP-Seq percent confirming:51.1111
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGCAGGTCATTCAGGTG
Suggested primer 2:CCTCCTCCTGATGGTCTCCA