Insertion junction: CLIP2.078329_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078329
Chromosome:chromosome 9
Location:3456285
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396028 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGCCTATTGCATGTAAATAGGTGGCAGGGAAAATTCGGGCGGAGCGA
Internal bar code:CAGCAGCACCAACATCGGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:559
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAACGCAAGGAAGGACA
Suggested primer 2:CTGCGTGTGTGTACGTGTTG