Insertion junction: CLIP2.078331_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078331
Chromosome:chromosome 3
Location:312016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800285 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCAGGCGCCGTGCTGGCTGCCAGGGGATCCCCTGCTGGCTGCAACAC
Internal bar code:GCAGCAGGTCGGGTAACAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATATCGGCCTACCTGCG
Suggested primer 2:ATGGATTCGGTGCGTTGTCT