Insertion junction: CLIP2.078333_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078333
Chromosome:chromosome 7
Location:999641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319500 (1 of 2) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase 5'UTR
Cre07.g319550 (1 of 1) PF10442 - FIST C domain (FIST_C) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTTACATGTTTGCTAGGCGTGTCGGTACTCCGTGCTCTGCATATGCC
Internal bar code:TGTTTCGCCGCCCAATAACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTTGCGAGAGATGTGT
Suggested primer 2:CCCGGATTTGCGTTGCATAG