Insertion junction: CLIP2.078334_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078334
Chromosome:chromosome 5
Location:3603759
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g234300 (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) CDS
Cre05.g234350 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTACGCCAGCAAGGCCGACGCGCGCGTGACCACCTTCCAGCGCGTAC
Internal bar code:TAATTATAAGGGTCGCCCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCGCAGCAAGTGAAGAA
Suggested primer 2:CGGATGAAGTGCTGGACTGT