Insertion junction: CLIP2.078338_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078338
Chromosome:chromosome 1
Location:5751770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041200 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAGGGCAACGGGCAACGGGCCCGGAAGCTGCCGGTTGCTGGCCCTG
Internal bar code:CGCGTCAGGGGCAAAGTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAACTTAGCAGGGGACT
Suggested primer 2:TGATTGCTGCGTTTGGGTTG