Insertion junction: CLIP2.078339_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078339
Chromosome:chromosome 17
Location:6543583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744847 SEC6 (1 of 1) K06110 - exocyst complex component 3 (EXOC3, SEC6L1); Component of the Exocyst Complex 3'UTR
Cre17.g744897 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCATATCCTCTGGATACACCACACATCAGCTCCTCCAGCAGCTTCGTC
Internal bar code:TGTTGCTTAGGAGGGTGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1109
LEAP-Seq percent confirming:71.875
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTCACCATGGCATCAA
Suggested primer 2:TTTATTGCCGATTGCGCTCG