Insertion junction: CLIP2.078341_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078341
Chromosome:chromosome 6
Location:6000889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCGCACACATCTCCCAGCCTTCCTCACACCCAGCCTGCATGATGTC
Internal bar code:AGTGCATTCGGCAGAGTGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2795
LEAP-Seq percent confirming:55.6962
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGTTTGTGGGCTTTTGG
Suggested primer 2:CAGCACTTGCAACCTCACAC