Insertion junction: CLIP2.078341_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078341
Chromosome:chromosome 6
Location:6000891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCGCTGCGGCGCGCGTTAAGAGCTTGGCGATGCCGTTCCAGCTGCG
Internal bar code:AGTGGTGGTCGACAGCACAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2685
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACTTGCAACCTCACAC
Suggested primer 2:CTCGGTTTGTGGGCTTTTGG