Insertion junction: CLIP2.078345_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078345
Chromosome:chromosome 10
Location:3971708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446950 (1 of 2) PTHR23181//PTHR23181:SF7 - RHO GTPASE ACTIVATING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGACATCACATTCGCTCCCTACAGGTCTGGACCCCACTGCAGCAGCT
Internal bar code:GTCCGTTTAGGTGGATTAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCTGATGGTATTCGGGT
Suggested primer 2:AGTCGACTACTGTTGCGCAA