Insertion junction: CLIP2.078346_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078346
Chromosome:chromosome 14
Location:2360669
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g623125 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCAACCGCGCCTTTCACCCCGGCAATCAGCCCGGCACACCGTGCCGG
Internal bar code:TATAATAGTTTACGGTAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4137
LEAP-Seq percent confirming:25.4545
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTGCTGCGTGTTTGTA
Suggested primer 2:CGCCACAGTTAACGACAAGC