Insertion junction: CLIP2.078350_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078350
Chromosome:chromosome 1
Location:5366396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037900 (1 of 2) K03257 - translation initiation factor 4A (EIF4A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGCCTTAACCCAGCTCCACCCCAGGACTCCAGCCTAGGCCTGATTG
Internal bar code:GTCCTCAGAGATTTCGACCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCGTACATGTTGCGGC
Suggested primer 2:ATACGCCCCAAAACCTCCTG