Insertion junction: CLIP2.078372_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078372
Chromosome:chromosome 16
Location:4790574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687650 ANK20 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATTCATTGCCACCAGCGCGTTGCAAATTGTTTGCCATCTTCTGGGGT
Internal bar code:TGGGGTTCCTAGAAGATGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAAAGGCCCAAGCAAGG
Suggested primer 2:TGGTTTTGGGACTGCACTGT