Insertion junction: CLIP2.078373_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078373
Chromosome:chromosome 9
Location:5704103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACGCTTGGAATGAGTTTAAGAGCGTGGAAGAATGTTTAGAAATATC
Internal bar code:TAAAGAAGAGTGCTGAAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2907
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGGTGTCGGCAGAAAT
Suggested primer 2:TGCGATGGTTGTTGTTGCTG