Insertion junction: CLIP2.078377_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078377
Chromosome:chromosome 3
Location:3739777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169150 (1 of 1) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATCAGCACGGAACTGGCGGAGGTGGCACTAGCGGGCATTTGTGACA
Internal bar code:ATCCTAGTGCGCTTCGTTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:57.5
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTGTGGTATTGAAGGA
Suggested primer 2:CCACTACTGTTGACCAGCGT