Insertion junction: CLIP2.078378_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078378
Chromosome:chromosome 2
Location:6723410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387467 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTCAAAATTGCAAGTACTAACTCAGGGCACCGAGAATCCTCAAATGC
Internal bar code:ATCGGGTCTGAAGGCCGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1750
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTACTTCGGTGCCCCT
Suggested primer 2:TGTCCTCGACGGTGTTCTTG