Insertion junction: CLIP2.078380_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078380
Chromosome:chromosome 6
Location:3441467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278102 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTAGATTATTTCTGCAACAAACCAATTTCAAGATCCAAGAGCACTAG
Internal bar code:GGTAATGAGGGCGAGCTCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1715
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTTGTACGACCACACC
Suggested primer 2:TTTCCCTCCTCAAGCACGTC