Insertion junction: CLIP2.078381_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078381
Chromosome:chromosome 17
Location:6622459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745547 (1 of 1) PF05182 - Fip1 motif (Fip1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGATTTACAGTGTAGCGCTGACGCCATGCGAGACTGCTGGGACTGTC
Internal bar code:GGGCAGGGAGGAAAGCCGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2175
LEAP-Seq percent confirming:95.7747
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTTTGCGTCCGCTTCCG
Suggested primer 2:AAACGCCCCATCCCATTCAT