Insertion junction: CLIP2.078382_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078382
Chromosome:chromosome 3
Location:3347444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166201 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCCTCCCCAGCTACCCATCCTCCTTCCCCTTCCCCTCTGCGTGCCCC
Internal bar code:TCGATCTCTAGAACAGTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:76
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCCTCATTCCCTCTCA
Suggested primer 2:TACGACTCTCCATCTGCCCA