Insertion junction: CLIP2.078383_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078383
Chromosome:chromosome 12
Location:7542549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556300 CFAP300,C11orf70,FBB5 Flagellar basal body proteome 5 / Dynein assembly factor; (1 of 1) PF14926 - Domain of unknown function (DUF4498) (DUF4498) 3'UTR
Cre12.g556350 CFAP300 (1 of 1) PTHR31339//PTHR31339:SF10 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCCGGCTTTGCCTCAATGCCTACAAGCCACCTGGACAACTGTTGT
Internal bar code:TTGCCAATCAACTAGTTGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4194
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGGAGCTTGTGCCTTGA
Suggested primer 2:GCGAGGACTGGTATCGACAG