Insertion junction: CLIP2.078384_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078384
Chromosome:chromosome 3
Location:2892498
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g162550 MSN1 methylthioadenosine nucleosidase; (1 of 1) 2.4.2.28//3.2.2.9 - S-methyl-5'-thioadenosine phosphorylase / MTAPase // Adenosylhomocysteine nucleosidase / S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGCGTGGCTGAACGTGCGGTATGGCGCCGCCGGCACCATCCGACGCA
Internal bar code:CTACAGGAACTAGGTCCAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGAAGAGGCAGGAGAGG
Suggested primer 2:GGTGTCAGCAGAGGTTGTGA