Insertion junction: CLIP2.078385_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078385
Chromosome:plastome
Location:119555
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802312 psaB,ChreCp048,2717038 photosystem I P700 apoprotein A2; (1 of 1) K02690 - photosystem I P700 chlorophyll a apoprotein A2 (psaB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTCAAGGTTCTGGTCAAGCTATTTTAACTTTCTTAGGTGGTTTCCAC
Internal bar code:TTAGTGAGGTTCGCCGCCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:256
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AACCACGAGCATCAAGAGCA
Suggested primer 2:CCACGTAGCATGGCAAGGTA