Insertion junction: CLIP2.078386_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078386
Chromosome:chromosome 13
Location:3235970
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g585550 HAP2 (1 of 12) IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase; Putative haloperoxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAATGGGTTGAGAGATTGAAGCAGGCAGTTGGCGGTTGGCGGTTGGTG
Internal bar code:CGTCGGTTGATGCGTGTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTTGCACCCTACCTCGT
Suggested primer 2:AGAGCACACGTCATGCATGA