Insertion junction: CLIP2.078389_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078389
Chromosome:chromosome 1
Location:3537398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023000 PHT1,PHT4A,MFT12,PHT4-1 Sodium-dependent phosphate transporter, major facilitator superfamily; (1 of 3) PTHR11662:SF223 - SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACACCGCGCTGTTACGCCCCACCGCGTCCCGCTACGTATGTCGCCAC
Internal bar code:TTTATTTTGTCGGAGCCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCCTCACCTCCCTCAC
Suggested primer 2:AATCGGAGGGGTGTATGGGA