Insertion junction: CLIP2.078394_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078394
Chromosome:chromosome 7
Location:5538928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351600 HEL40 (1 of 2) PTHR24031:SF303 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL; possible helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAGTCCCGGCAACCCTGGCCCTGGGACCTGGCTGGCATAATATGTGTG
Internal bar code:CTTTGACTCCCTATGTGCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:637
LEAP-Seq percent confirming:18.5185
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTGTAGGGCGGGGTTCT
Suggested primer 2:CGTCTGTGATGCGCTTGATG