Insertion junction: CLIP2.078396_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078396
Chromosome:chromosome 1
Location:2928633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800058 (1 of 5) PTHR30405 - TRANSPOSASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGTACTGTCGTGCGAAGCTGGAGGTGAACGACGATGAGGTGCCGCTG
Internal bar code:AGTATTTAGGTGTGCCCTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3020
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGTGAAGGTGGGTGAG
Suggested primer 2:CGCTCGCAGCAATTAGGTTC