Insertion junction: CLIP2.078396_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078396
Chromosome:chromosome 1
Location:2928635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800058 (1 of 5) PTHR30405 - TRANSPOSASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCATTTGGGAAAGTTCGCCCTGTAGTGCTGCTCCAGGTTGGTGAGGAC
Internal bar code:GTGGAGAAGTGGTCGAGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2123
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGCAGCAATTAGGTTC
Suggested primer 2:GGTGAGTGAAGGTGGGTGAG