Insertion junction: CLIP2.078397_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078397
Chromosome:chromosome 3
Location:7631346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204450 (1 of 9) IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCGGGCCGTTCATGTACTTGGAGGGTGCCGGCGGCTCCACGGCTG
Internal bar code:GCTGTTTTCTGATTACGACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1580
LEAP-Seq percent confirming:17.9487
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGCAAACAGATCTTCCT
Suggested primer 2:GGAACCCTGCACTGCTATGT