Insertion junction: CLIP2.078401_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078401
Chromosome:chromosome 8
Location:4441107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385550 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGCCTACACTAACTACAAGAACCAAAAGCGCGCACATCGAGGGCCTC
Internal bar code:GCATTGCTTGCCCATTTGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAGCAGCTGTGTGTTG
Suggested primer 2:CCCATCTTTTCCCCTTCCCC