Insertion junction: CLIP2.078412_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078412
Chromosome:chromosome 6
Location:4703538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAACCGTGAGCACCGCGTCCTACTGACCCATTTGATAATCGTGCATG
Internal bar code:TTGGGAAGGTGGTTAGGGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2773
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGCCCTACCTCTCACAC
Suggested primer 2:GACAGGCACGTTTTGAGCTG