Insertion junction: CLIP2.078425_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078425
Chromosome:chromosome 12
Location:2416031
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g507650 CDJ1 (1 of 1) PTHR24078//PTHR24078:SF315 - DNAJ HOMOLOG SUBFAMILY C MEMBER // MOLECULAR CHAPERONE DNAJ; Chloroplast DnaJ-like protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCGCAGTGCCAGGGCACGGGCCAGGTGGTGTCGGCGGTGCGCACGCC
Internal bar code:GGCGTGCTATCAATTTCTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCTGATCTCCACGTCCG
Suggested primer 2:GTCTGTGGGTGTAGTGTCCG