Insertion junction: CLIP2.078427_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078427
Chromosome:chromosome 17
Location:4382843
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g730550 (1 of 3) PTHR22298:SF39 - ENDOGLUCANASE 7 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTGTGTGTGGCACTTGGCGATGTAGGAGGCCGCCCAGTCTAGGTTG
Internal bar code:GCGCATACTTATCGTAACATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTCAGATGTCTGGCAAC
Suggested primer 2:TACAAATCCCGGCACCTTCC