Insertion junction: CLIP2.078433_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078433
Chromosome:chromosome 2
Location:3919347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101900 EXN6 (1 of 7) IPR002562//IPR012337 - 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease 3'UTR
Cre02.g101950 TRM2B,TMU2 tRNA (uracil-5)-methyltransferase; (1 of 1) K15332 - tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] (TRMT2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACAAACCGCAAGGCTGCGCGCCTGCGCCCTTGCTCCGCCAGTCCAT
Internal bar code:CCTACTATATCGCGACGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2868
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGTACCTATGAGGGCG
Suggested primer 2:TGGGGATGATGAGGAGCAGA