Insertion junction: CLIP2.078439_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078439
Chromosome:chromosome 12
Location:7634121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555650 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATAGCTAACGCAGATGAGTATAATCCATATCACATATCACTGTCATAA
Internal bar code:TTTACACGAGATATCATATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1385
LEAP-Seq percent confirming:52.7778
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGTACTCAGCTTTTCCG
Suggested primer 2:GGTCCATGGGTCATCTGCAT