Insertion junction: CLIP2.078440_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078440
Chromosome:chromosome 6
Location:3000677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274150 HFO32,HFO6,HFO31,HFO43 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAACCGCCTTGCAAACGCCCTCCCCCGTCTCTCTGCCGATCGCTAGGG
Internal bar code:CGAGCGATCCGTGTCGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCACCTGGCTTTCGTCT
Suggested primer 2:AGGCGAAAAGATTCCTGGCA