Insertion junction: CLIP2.078443_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078443
Chromosome:chromosome 1
Location:4816476
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g033550 PDI2 (1 of 1) PTHR18929:SF87 - PROTEIN C03H12.1, ISOFORM A; Protein disulfide isomerase 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACAAAACCTCAACTGCTTTTTAGATGTGGTCTTTGAAACAAGGATATT
Internal bar code:TGGGTTCTAGCAAGGGAATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:935
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCTGTCACACGTACCC
Suggested primer 2:GAGGGACCAGTAGAGGAGGG