Insertion junction: CLIP2.078451_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078451
Chromosome:chromosome 9
Location:3464167
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g396065 ALK5 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Aurora-like kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCACAATGCGCCATCATGCAAGGAGGCCTTATTCAACACACTTGCTT
Internal bar code:TATTGTGGAGGTACCACTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATCATCAGGGTGGCTCCTC
Suggested primer 2:GCCGATCAGATGGACGATGT