Insertion junction: CLIP2.078456_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078456
Chromosome:chromosome 1
Location:1380900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007200 (1 of 1) K16675 - palmitoyltransferase ZDHHC9/14/18 (ZDHHC9_14_18) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCTCCGAAAACCTTTCGGTGTTGGAGAGCGGATGTCCGAAATGCATG
Internal bar code:CCTGTAGGTAAATATGGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1680
LEAP-Seq percent confirming:87.7193
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCACAGCTCTGCAATGT
Suggested primer 2:CCGTATGCAACCAGTGGTCT