Insertion junction: CLIP2.078457_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078457
Chromosome:chromosome 6
Location:4729642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279300 (1 of 1) 2.7.10.1//2.7.10.2//2.7.11.1 - Receptor protein-tyrosine kinase / Receptor protein tyrosine kinase // Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR
Cre06.g279350 (1 of 1) 3.5.1.17 - Acyl-lysine deacylase / Epsilon-lysine acylase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGTAGACAGCAAGCTGCTTGATCACTCACGGCGCTTTCGCTGCGCC
Internal bar code:GAGGTACAATCACGGAAAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5463
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAAGGAGCTGAACCGGG
Suggested primer 2:CAGCAACCAAGCAACAGGAC