Insertion junction: CLIP2.078460_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078460
Chromosome:chromosome 17
Location:3166463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720900 (1 of 100) IPR001810 - F-box domain 5'UTR
Cre17.g720950 SRD3 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; (1 of 1) 1.3.1.94 - Polyprenol reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGGCAGAGTCGGTTGATGGTGGTTGCGTGGGCCGGTCGCCTATCGCC
Internal bar code:GGCACATCCTTTGGCCCTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTGAGGGTCAGCTGAG
Suggested primer 2:GAAGCACTGCTGATGATGCG