Insertion junction: CLIP2.078467_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078467
Chromosome:chromosome 2
Location:2272332
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g090150 CAF2,PANC,PAN3,PANC1 (1 of 1) 6.3.2.1 - Pantoate--beta-alanine ligase (AMP-forming) / Pantothenate synthetase; Pantothenate synthetase 3'UTR
Cre02.g800194 (1 of 2) PF14753 - Domain of unknown function (DUF4475) (DUF4475) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGCTTGATGTTACAACACCACATGCACGGCTCCCTTATTCACCGCGC
Internal bar code:ACCGGAGGTTCGGAGATCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGGTTGACCCGAATGAC
Suggested primer 2:AGATGGCATGAAGAGGCGAG