Insertion junction: CLIP2.078470_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078470
Chromosome:chromosome 7
Location:3756172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338250 (1 of 4) PF04073 - Aminoacyl-tRNA editing domain (tRNA_edit) 3'UTR
Cre07.g338300 FBB14 Putative flagellar/basal body protein; (1 of 1) PTHR10489//PTHR10489:SF612 - CELL ADHESION MOLECULE // BENT, ISOFORM F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAACGCCCCGCAGCCACCACCGCAGTTGGCATTCTCATCCTGCCTTG
Internal bar code:GGGTAGTGGGTACGGGACTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3777
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGATGGCATAGTGGACT
Suggested primer 2:CTAGTGTGGTCTGGGGCAAG