Insertion junction: CLIP2.078471_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078471
Chromosome:plastome
Location:61763
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802289 ChreCp025,rps14,2716974 (1 of 1) K02954 - small subunit ribosomal protein S14 (RP-S14, MRPS14, rpsN); 30S ribosomal protein S14 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTAAAAAAAGCATGATTCAGCGTGAATTAAAACGCCAAAAATTAGTA
Internal bar code:CTACATAGACATTAATGACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTACCACTGCCACTAAT
Suggested primer 2:AGCAACCTGTGTCCAACCAA