Insertion junction: CLIP2.078477_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078477
Chromosome:chromosome 9
Location:5232317
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g407050 MMP24 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAGGGTGCACGAGTTCAACGACACGGCCACGGGCGAGACCGCCACA
Internal bar code:CTAGCAAGCAGATTATTAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGAGGAGGAGGAGGTT
Suggested primer 2:CTTCCCCAACCACCATCTCC