Insertion junction: CLIP2.078482_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078482
Chromosome:chromosome 7
Location:725895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCTGGGTGTTGGAGGATGATGAGAAGGGCTTGGGGACAGAGGCATT
Internal bar code:GACCCGGACGCCCTAAATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:41.9355
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTGCACCCAGAAACCCA
Suggested primer 2:CAACCCCCTGGCTCATCAAT