Insertion junction: CLIP2.078488_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078488
Chromosome:chromosome 17
Location:5677433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTGAATTTCCCAGGGTGCCTTATTGGCATCTCTCCCCCGGAGTCGCG
Internal bar code:GTGCGGTTCGGCAATCTTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3560
LEAP-Seq percent confirming:96.2025
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGTGTCACATACGGT
Suggested primer 2:GAAGAGCCTGACGAACACCA